Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIH-------KKAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPERVPITEDMPT-NPESTYGETKLIMEKMMKWCDKAYGMKFVAL-RYFNVAGAKADGSIGEDHKP-ESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY
1NAI Chain:A ((1-336))MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRT-LDEMAQDTWHWQSRHPQGY


General information:
TITO was launched using:
RESULT:

Template: 1NAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168571 for 2882 contacts (-58.5/contact) +
2D Compatibility (PS) -35554 + (NN) -19622 + (LL) -76
1D Compatibility (HY) -26000 + (ID) 6800
Total energy: -256623.0 ( -89.04 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_1NAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NAI-query.scw
PDB file : Tito_Scwrl_1NAI.pdb: