Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFT-EKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT |
2DY1 Chain:A ((555-648)) | ------------------------------------------------------------------------------------------------------------------AASLAFKKVMAEAHPVLLEPIYRLKVLAPQERVGDVLSDLQARRGRILGMEQEGALSVVHAEVPLAEVLEYYKALPGLTGGAGAYTLEFSHYAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41846 for 603 contacts (-69.4/contact) +
2D Compatibility (PS) -9927 + (NN) -396 + (LL) 7804
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -46765.0 ( -77.55 by residue)
QMean score : 0.437
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