Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTAN----LGP---GFDSCG---LALTLYLTLDIGA-EADSWYIEHNIGGGIPHDETNVIIETALNLAPN---LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLF-PDCALIAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRN-LANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 3PYF Chain:A ((6-300)) | VTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGS---DVPFALHGGTALGTGRGEE--LATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGD-PPRLGEPGPVLAALAAGDPDQLAPLL-GNEM-QAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183615 for 2461 contacts (-74.6/contact) +
2D Compatibility (PS) -29843 + (NN) -5362 + (LL) 276
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -230294.0 ( -93.58 by residue)
QMean score : 0.458
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