Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQILVVDDDRHILKLVGHYLRAEGFHVLEASDGVEAEKIVETEQVHLAVIDVMMPNMDGFELCQKMRASYPDIPVIMLTAKDALADKSRGFEVGTDDYVTKPFEPEELIFRIRALLRR--SNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIR-IVTVRGVGYKLEETR
4KFC Chain:A ((3-225))
MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLR-QWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS---APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRF----
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119667 for 1626 contacts (-73.6/contact) +
2D Compatibility (PS) -24178 + (NN) -14479 + (LL) 516
1D Compatibility (HY) -14800 + (ID) 3050
Total energy: -175658.0 ( -108.03 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: