Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
4MKH Chain:A ((3-214))
MNIVLMGLPGAGKGTLAEKIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRPIDYVINIQVRKEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQMAPLLAFYDSKEVLVNVNGERDIEDVFADVDVIL---
General information:
TITO was launched using:
RESULT:
Template:
4MKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59160 for 1641 contacts (-36.1/contact) +
2D Compatibility (PS) -23155 + (NN) -15289 + (LL) 248
1D Compatibility (HY) -24000 + (ID) 7250
Total energy: -128606.0 ( -78.37 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4MKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKH-query.scw
PDB file :
Tito_Scwrl_4MKH.pdb
: