Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKLEITLKRSLIGRPQPQRKTVQALGLGKTNSVVVKEDNPAIRGMITKVSHLVDVKEV
2J28 Chain:Y ((4-58))
---IKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE-
General information:
TITO was launched using:
RESULT:
Template:
2J28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28052 for 322 contacts (-87.1/contact) +
2D Compatibility (PS) -5911 + (NN) 330 + (LL) 608
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -38325.0 ( -119.02 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2J28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J28-query.scw
PDB file :
Tito_Scwrl_2J28.pdb
: