Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA
4U67 Chain:C ((2-193))
-AQINVIGQNGGRTIELPLP------EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAAL--------
General information:
TITO was launched using:
RESULT:
Template:
4U67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32482 for 1271 contacts (-25.6/contact) +
2D Compatibility (PS) -20572 + (NN) -13290 + (LL) 1620
1D Compatibility (HY) -12000 + (ID) 3500
Total energy: -80224.0 ( -63.12 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4U67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U67-query.scw
PDB file :
Tito_Scwrl_4U67.pdb
: