Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPSFLK----LVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQ--EQIPVRTVIITIFLMFFIATGLG--VWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLA-VYVNAYDAGIANLLWQGEMV-TIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDEDIRNHRYTL--PYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPI----MLLSLITIYPVY-------RNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT------ |
| 1UJN Chain:A ((1-347)) | MQRLEVREPVPYPILVGEGVLKEVPPLAGPAALLFDRRVEGFAQEVAKALGVR----HLLGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYLRGVAYLAFPTTTLAIVDASVGGKTGINLPEG-----KNLVGAFHFPQGVYAELRALKTLPLPTFKEGLVEAFKHGLIAGDEALLKVEDLTPQSPRLEAFLA-RAVAVKVRVTEEDPLEKGKRRLLNLGHTLGHALEAQTRHALPHGMAVAYGLLYAALLGRALGGEDLLPPVRRLLLWLSPPPLPPLAFEDLLPYLSLHWVVPLAPGRLVVRPLPEGLLREAFAAWREELKGLGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -371099 for 2592 contacts (-143.2/contact) +
2D Compatibility (PS) -31473 + (NN) 5997 + (LL) 700
1D Compatibility (HY) 2400 + (ID) 1650
Total energy: -395125.0 ( -152.44 by residue)
QMean score : 0.226
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