Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIMLVCSAGM-STSLLVTKMEKAAEAQGIEAKIFAVAEAEAANHL-----DEIDVLLLGPQVRF-LEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK
2KYR Chain:A ((8-104))
----LCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERF------ESRDVYEITLQD-AIKNAAGIIKEIEEMIA
General information:
TITO was launched using:
RESULT:
Template:
2KYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59460 for 688 contacts (-86.4/contact) +
2D Compatibility (PS) -9317 + (NN) 1550 + (LL) 952
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -69925.0 ( -101.64 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2KYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYR-query.scw
PDB file :
Tito_Scwrl_2KYR.pdb
: