Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKDLRNYKGIKKIMAILAVFTLVQGAAI--IVMAITLARAITDLFHEHPFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPRFARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILMITLPILIVFMIILGLAAKKQADSQFETYRVLS--NHFVD-SLKGLETLKYLGLSHDHEGKIASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLIDGNMNLPIALSVLILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQAKAEKPEMDALPLTTFAENTEFSFENITVKHGADDADSLHKASFTVKGFEKIGIIGATGAGKSTLIDVLSGFLTPTSGEFHWNGKSGASLASTDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTEDEMKKAAESAGLNKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPVVLMDEPTAHLDIETEYELKKPMLDLFEDRLVFFATHRLHWMLEMDRIIVLDHGAVVETGTHEELLSRKGFYYNLVKAQLEEV |
4Q4J Chain:B ((38-590)) | ---------------TLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFS-GIVTLAGAVIMMFR--VNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILD-LEEEKDDPDAVELREV--RGEIEFKNVWFSYDKKKP-VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATCNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328332 for 4003 contacts (-82.0/contact) +
2D Compatibility (PS) -58724 + (NN) -22743 + (LL) 2104
1D Compatibility (HY) -52000 + (ID) 6500
Total energy: -466195.0 ( -116.46 by residue)
QMean score : 0.375
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