Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIFAKEDDLE-EIISSHPKILLNFWAEWCAPCRCFWPTLEQFAEMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFKSLAK
1T8E Chain:B ((4-100))
--IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK--------
General information:
TITO was launched using:
RESULT:
Template:
1T8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72823 for 684 contacts (-106.5/contact) +
2D Compatibility (PS) -9943 + (NN) 342 + (LL) 976
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -91448.0 ( -133.70 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1T8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8E-query.scw
PDB file :
Tito_Scwrl_1T8E.pdb
: