Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
2O38 Chain:A ((84-107))
-ERLMTLLNALDQDVEIVIRKKPRS------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2057 for 75 contacts (-27.4/contact) +
2D Compatibility (PS) -2700 + (NN) -423 + (LL) 4860
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -1720.0 ( -22.93 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2O38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O38-query.scw
PDB file :
Tito_Scwrl_2O38.pdb
: