Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK
4HOY Chain:A ((4-191))
-ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGP-NFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQ-GQVPQAMNQINAYK
General information:
TITO was launched using:
RESULT:
Template:
4HOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119689 for 1595 contacts (-75.0/contact) +
2D Compatibility (PS) -19490 + (NN) -3583 + (LL) 380
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -160482.0 ( -100.62 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4HOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HOY-query.scw
PDB file :
Tito_Scwrl_4HOY.pdb
: