Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKYLKVSR-IIKRRPVAKEVADKGRVKVNGVLAKSSTDLKLNDQVEIRFGNKLLTVKVLEMKDS-TKKEDAIKMYEIINETRIETDEQA
2K6P Chain:A ((1-84))
MRIDKFLQSVGLVKRRV-LATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYIAPKTKE-------
General information:
TITO was launched using:
RESULT:
Template:
2K6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -622 for 523 contacts (-1.2/contact) +
2D Compatibility (PS) -8472 + (NN) 2790 + (LL) 512
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -11892.0 ( -22.74 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2K6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6P-query.scw
PDB file :
Tito_Scwrl_2K6P.pdb
: