Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDEVFEKMLELLRQQLGDPQLDITPESSLHDDLAIDSIALTEFIINLEDVFHLEIPDEAVEHMSSVQQLLDYIIEHK
2L0Q Chain:A ((9-80))
-------ERVKKIIVEQLGVDEAEVKNEASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVNSHQ
General information:
TITO was launched using:
RESULT:
Template:
2L0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55361 for 498 contacts (-111.2/contact) +
2D Compatibility (PS) -7866 + (NN) -7014 + (LL) 632
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -74909.0 ( -150.42 by residue)
QMean score : 0.813
(partial model without unconserved sides chains):
PDB file :
Tito_2L0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L0Q-query.scw
PDB file :
Tito_Scwrl_2L0Q.pdb
: