Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLPEVQLDAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDN-------YKTDLSQFIKSLP---KGHRLIIVTPYNAK-NMSQVTTVRDYELSLMK----KYNYITVADWYKVATEHPEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 3X0H Chain:A ((80-205)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKPDIVQFMLGTNDVNIGHRNADSIIGSYTIMLNAMRAANPRVKVIVDKIIPTSWSDATIEAVNTAIPGWVQQQTTAESPVVIADCSRAAGFTNDM-LRDDGVHPNS-K--GDQFIAGQIGPKLIQLIKDV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39626 for 753 contacts (-52.6/contact) +
2D Compatibility (PS) -12011 + (NN) -3995 + (LL) 39252
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -22680.0 ( -30.12 by residue)
QMean score : 0.629
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