Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNQRKTLYGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEKAVII
1XMO Chain:Q ((3-80))
-----KKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMD
General information:
TITO was launched using:
RESULT:
Template:
1XMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5681 for 488 contacts (-11.6/contact) +
2D Compatibility (PS) -8248 + (NN) -1296 + (LL) 452
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -24523.0 ( -50.25 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1XMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMO-query.scw
PDB file :
Tito_Scwrl_1XMO.pdb
: