Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQQETRLKVADNSGAREILTIKVLGGS------------GRKFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKTGARRPDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMKIVSLAPEVL |
1SM1 Chain:I ((2-133)) | -IMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDRRFMKIVSLAPEV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 519298 for 5356 contacts (97.0/contact) +
2D Compatibility (PS) -10612 + (NN) -1986 + (LL) 384
1D Compatibility (HY) 3600 + (ID) 600
Total energy: 510084.0 ( 95.24 by residue)
QMean score : ?
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