Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYD-LTRGRITYRFK
1JT8 Chain:A ((16-85))
--RKEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKN-RIWVREGDVVIVKPWEVQGDQKCDIIWRYT
General information:
TITO was launched using:
RESULT:
Template:
1JT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31307 for 455 contacts (-68.8/contact) +
2D Compatibility (PS) -7406 + (NN) -1308 + (LL) 272
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -43249.0 ( -95.05 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1JT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT8-query.scw
PDB file :
Tito_Scwrl_1JT8.pdb
: