Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICE--YCKVIRRNGRVMVICPTNPKHKQRQG------
1HGV Chain:A ((1-46))
MDFNPSEVASQVTNYIQAIAAAGVGVLALAIGLSAAWKYAKRFLKG
General information:
TITO was launched using:
RESULT:
Template:
1HGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2519 for 152 contacts (16.6/contact) +
2D Compatibility (PS) -3541 + (NN) 3788 + (LL) 0
1D Compatibility (HY) -800 + (ID) 300
Total energy: 1666.0 ( 10.96 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_1HGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HGV-query.scw
PDB file :
Tito_Scwrl_1HGV.pdb
: