Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH
3RSN Chain:A ((100-117))
------------------------------------DKDIIPFIDKYWECMTTRQRPGKMTWPNNIVKTMSKERDVFLVKEHPDPGSKDPEEDYPKFGLLDQDLSNIGPAYD---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RSN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2462 for 62 contacts (-39.7/contact) +
2D Compatibility (PS) -1812 + (NN) -1722 + (LL) 3924
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -4272.0 ( -68.90 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3RSN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RSN-query.scw
PDB file :
Tito_Scwrl_3RSN.pdb
: