Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGA----TGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDK-KYAKKMTEIIDLYDLTRYDK
2A1U Chain:A ((275-330))----------------------------------------------------------------------------------------------------------------------------------YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILKKK-------


General information:
TITO was launched using:
RESULT:

Template: 2A1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 130 for 312 contacts (0.4/contact) +
2D Compatibility (PS) -5564 + (NN) -3897 + (LL) 9148
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -3633.0 ( -11.64 by residue)
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_2A1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A1U-query.scw
PDB file : Tito_Scwrl_2A1U.pdb: