Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
3D36 Chain:A ((3-225)) | ----------------------------------------------------------------------------------------------------------------------------HMVIR----------LAASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAEAIITDYLTFAK-PAPETPEKLN---VKLEIERVIDILRPLANMSCVDIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVL-IRIADTGVGMTKEQLERLGEPYFT---TKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113515 for 1605 contacts (-70.7/contact) +
2D Compatibility (PS) -22847 + (NN) -8374 + (LL) 12816
1D Compatibility (HY) -16000 + (ID) 2450
Total energy: -150370.0 ( -93.69 by residue)
QMean score : 0.409
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