Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MLIIELLKALFLGVVEGVTEWLPVSSTGHLILV----QEFMKLNQSKSFVEMFNIVIQLGAIMAVIVIYF-------KRLNPFQPGKSAREIRLTWQLWLKVVIA--CIPSILIALPFDNWFEAHFNFMIPIA-----IALI---------FYGFVFIWVEKRNAHLKPQVTELASMSYK------TAFLIGCFQVLSIVPGTSRSGATILGAIIIGTSRSV---------AADFTFFLAIPTMFGYSGLKAVKYFLDGN-VLSLDQSLILLVASLTAFVVSLYVI---RFLTD------YVKRHDFTIFGKYRIVLGSLLILYWLVVHLF---------------------------------------------- |
| 3J9Q Chain:A ((2-386)) | SFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVETAETPEAQASAVIGGISAAGERTGLQALLDGKSRFNAQPRLLVAPGHSAQ-QAVATAMDGLAEKLRAIAILDGPNSTDEAAVAYAKNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNKEIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRDDG-----YRLWGNRTLSSDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -282492 for 2192 contacts (-128.9/contact) +
2D Compatibility (PS) -28446 + (NN) -5389 + (LL) 772
1D Compatibility (HY) 4000 + (ID) 2800
Total energy: -314355.0 ( -143.41 by residue)
QMean score : 0.144
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