Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSST--SGQRKMEQIINDIEKLEVFPEVGFDADEKYGSEISNYHSTRGYTLSKDYIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
1DM7 Chain:A ((82-118))
-----------PPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYAT
General information:
TITO was launched using:
RESULT:
Template:
1DM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2527 for 163 contacts (-15.5/contact) +
2D Compatibility (PS) -3877 + (NN) -2118 + (LL) 1208
1D Compatibility (HY) -400 + (ID) 650
Total energy: -8364.0 ( -51.31 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_1DM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DM7-query.scw
PDB file :
Tito_Scwrl_1DM7.pdb
: