Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKVYREKTAKVEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN
3K2T Chain:A ((1-56))
-----------------------------------------------------------------------------------------------------------------------------EIVRTKQ---KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIET---
General information:
TITO was launched using:
RESULT:
Template:
3K2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13829 for 290 contacts (-47.7/contact) +
2D Compatibility (PS) -6022 + (NN) -4579 + (LL) 11388
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -21642.0 ( -74.63 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3K2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K2T-query.scw
PDB file :
Tito_Scwrl_3K2T.pdb
: