Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQA--INFQDLAS----KISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNL-EIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
| 4GNK Chain:B ((142-281)) | -----------------------------------------------------------------------------------------------NILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGGEENGILPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GNK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2401 for 707 contacts (3.4/contact) +
2D Compatibility (PS) -14097 + (NN) -6543 + (LL) 8228
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -16661.0 ( -23.57 by residue)
QMean score : 0.312
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