Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKALFTGSFDPVTNGHLDIIERASYLFDHVYIGLFYNLEKQGYFSIECRKKMLEEAIRQFKNVSVLVAQDRLAVDLAREVGAKYFVRGLRNSQDFDYEANLEFFNKQLADDIETVYLSTSPSLSPISSSRIRELIYFKASVKPFVPKSVVREVEKMSEE
3NBA Chain:A ((24-172))
----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHG-LVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL--
General information:
TITO was launched using:
RESULT:
Template:
3NBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107465 for 1133 contacts (-94.8/contact) +
2D Compatibility (PS) -15958 + (NN) -6187 + (LL) 580
1D Compatibility (HY) -15200 + (ID) 2800
Total energy: -147030.0 ( -129.77 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_3NBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBA-query.scw
PDB file :
Tito_Scwrl_3NBA.pdb
: