Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKW------LEKSIVQS---DVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPK--GTILVAKSSHTRIFQDLDEKEI--IVGGPYQATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKEAYVVLPTTISDEIPKEMARLSK |
| 3RRJ Chain:A ((222-501)) | -VITREMVRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLE--KPAVIDADAINVLDTSVLKERKSPA-VLTPHPGEMARLVKKTVG-DVKYNYELA-EEFAKENDCVLVLKSA-TTIVTD-GEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQ--GLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPEAIRRLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149675 for 2438 contacts (-61.4/contact) +
2D Compatibility (PS) -28874 + (NN) -7865 + (LL) 1176
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -207238.0 ( -85.00 by residue)
QMean score : 0.539
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