Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDVVEKQTAKSFIMNVL-NGLALGTVIVLIPGAILGELMKALLPMWS---GFATLIAATAVATSMMGLVI-GIMVGLNFKFNPIQSASLG-LAVMFAGGAATFLKGA---IMLKGTGDIINMG--------ITAAL---GVLLIQFLSDKTKSFTLIVIPTVTLLLV---------GGVGHVLLPYVKMITTMIGQG-IASLLGLQPV-L-MSILIA--------MIFCF------LIVSPITTVGIALAISLSGIGSGAANLGICAASF-GLCMAGWSVNSKGTALAHV-LGSPKISMANVLAKPK----------------------IMLP-------MISSAAILG--ILGALFNIQG-TPASA-GFGISGLIGPINALNLAKGGWSVMNMLLIIIIFVAAPI-ILNFIFNYLFI------KVLKIIDPMDYKLDI |
| 4QT9 Chain:A ((19-432)) | LSD------------DALMDTVQRRTFLYFWEGA---EPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHW----SPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQG--TEAGPLFWAQYSFLGLDPVGLK-DEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFS-ETDNWYPQRYLAIDQGPIA--VMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -355717 for 2530 contacts (-140.6/contact) +
2D Compatibility (PS) -33135 + (NN) -584 + (LL) 2932
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -398704.0 ( -157.59 by residue)
QMean score : 0.192
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