Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTS-----------KAAQQSMLTLILSRVFDTQ---YGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAA-KKELTEANYKEAYKNYT------PETSVQVIKLDAEDKAKSVLKDVKA--D---GADFAKIAKEKTTATD---KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVS-DVVSTVDSTTYKTSYYIIKVTDKTEK-KSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 3RFW Chain:A ((22-273)) | ------------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPL-YTKELD--------------------------RAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQ--STMVKPFTDAAFALKNGTITTTPVKTNF------GYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKK--VINQKGQDLLNSAKVEYK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34870 for 1277 contacts (-27.3/contact) +
2D Compatibility (PS) -23756 + (NN) -7592 + (LL) 4192
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -74026.0 ( -57.97 by residue)
QMean score : 0.550
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