Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
| 1PFS Chain:A ((1-78)) | -----------------------------------------------------------------------------------------------MNIQITFTDSVRQGTSAKGNPYTFQEGFLHLEDKPHPLQCQFFVESVIPAGSYQVPYRINVNNGRPELAFDFKAMKRA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31980 for 439 contacts (72.8/contact) +
2D Compatibility (PS) -7864 + (NN) 4776 + (LL) 8484
1D Compatibility (HY) 0 + (ID) 350
Total energy: 37026.0 ( 84.34 by residue)
QMean score : -0.037
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