Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKDKYIVLCLLCAIATSNLSAVTVFAQDAQTILTQATTVTDQTSEKAGENSSAEATSASESVSSEATTVVPEASLPSTDLHAQPADSKTAPTETVIEGQTETNPTTSPDKQFLQQAIPKEKHRLGRKQIQANPKLQLLVSL |
2LQO Chain:A ((1-88)) | ----------------------------------MVTAALTIYTTSWCGYCLRLKTALTANRIAYDEVDIEHN-RAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAKLVKIAGLEHH------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42274 for 597 contacts (70.8/contact) +
2D Compatibility (PS) -9183 + (NN) -424 + (LL) 5464
1D Compatibility (HY) -400 + (ID) 750
Total energy: 36981.0 ( 61.94 by residue)
QMean score : 0.170
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