Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEG-ILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDF---YQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRI-------KNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQVGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
| 3BFM Chain:A ((38-169)) | ----------------------------------------------------------------------------------------GLVVYELGTDVLRAALVLAPEVP-LAKAMAMLPVCGVGFQNALGALAPPEVAVHL-------D-WNGALRINGARCGRLRIAASTDDPDTQPDWLVVGLDLPLWPEG------------DGG-----------E-TPDETALYAEGCADVAAPRLLESWARHCLHWINRWDEGELETIHGEWRGLAHGMGEARTEAGRSGT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104846 for 876 contacts (-119.7/contact) +
2D Compatibility (PS) -12562 + (NN) -1115 + (LL) 8716
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -113707.0 ( -129.80 by residue)
QMean score : 0.390
|
|
|