Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFFGITKDN----QFIT-PLSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDKFTEAG------ACGTAAVISPIGGIQNGD-DFHVFYSETEVGPA-TRKLYDELVGIQFGDVEAPEGWIYKVD |
| 5BWT Chain:A ((44-369)) | ---------------------MVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPD-AAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILCPVGAYFP--VTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI--PTMENGPELILRFQKELKEIQYG-IRAHE-WMFPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124716 for 2416 contacts (-51.6/contact) +
2D Compatibility (PS) -33568 + (NN) -15069 + (LL) 1068
1D Compatibility (HY) -29200 + (ID) 4900
Total energy: -206385.0 ( -85.42 by residue)
QMean score : 0.429
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