Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDLIVDLQKIVADILKD |
3FXD Chain:A ((21-43)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEKGPWDKSNFLRVIGKKLIAIRDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6600 for 102 contacts (-64.7/contact) +
2D Compatibility (PS) -2399 + (NN) -1585 + (LL) 9208
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -2826.0 ( -27.71 by residue)
QMean score : 0.617
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