Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGDNIKSLRRTHDLTQPEFAKIIGISRNSLSRYENGTSSVSTELIDRICQKFNVSYVDIVGEDKMMTPVEDYQLTIKIEVLKERGSAILSRLYRHQDEQGIAFDDESNPWILISDDVADLVNTKIYLVDTFEELERYNGYLDGIERMLNLANHQVVA
2GZU Chain:A ((1-60))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE--------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30508 for 398 contacts (-76.7/contact) +
2D Compatibility (PS) -6440 + (NN) 632 + (LL) 6876
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -34690.0 ( -87.16 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_2GZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZU-query.scw
PDB file :
Tito_Scwrl_2GZU.pdb
: