Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
| 4JHD Chain:A ((196-249)) | ----------------------------------------------------------------------------------------------------------------DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVA-LDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2611 for 261 contacts (-10.0/contact) +
2D Compatibility (PS) -5535 + (NN) 616 + (LL) 9256
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -2124.0 ( -8.14 by residue)
QMean score : 0.340
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