Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPL-VAENQVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVMTKFHDQKFSK
1XMO Chain:P ((2-80))
--VKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQE-------
General information:
TITO was launched using:
RESULT:
Template:
1XMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40895 for 539 contacts (-75.9/contact) +
2D Compatibility (PS) -8128 + (NN) -3126 + (LL) 752
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -58647.0 ( -108.81 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1XMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMO-query.scw
PDB file :
Tito_Scwrl_1XMO.pdb
: