Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLD-----GVRLAYQKIKEKGETSIYREIDERNPM
2FIA Chain:A ((1-157))
MKIRVADEKELPMILQFLTEVKAYMDVVGITQWT--KDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQE---------------QDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQMNRLDFGSFYLYVKELE----------------
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87115 for 1063 contacts (-82.0/contact) +
2D Compatibility (PS) -16219 + (NN) -6651 + (LL) 1976
1D Compatibility (HY) -9200 + (ID) 1600
Total energy: -118809.0 ( -111.77 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: