Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLMWDVLTGKESVRTLKKQLDKELIHSVYAPRKRSKFHDIITSHHKEIDEVAINTKTAIHKVANQLDEAIKGEFRSKVEESIESNQQKYNHL
3QNJ Chain:A ((146-205))
--------------------------------QTRNQGDHLLHSTRKQV--LPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKL
General information:
TITO was launched using:
RESULT:
Template:
3QNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1992 for 302 contacts (-6.6/contact) +
2D Compatibility (PS) -5579 + (NN) 115 + (LL) 2780
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -7376.0 ( -24.42 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3QNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QNJ-query.scw
PDB file :
Tito_Scwrl_3QNJ.pdb
: