Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHRQAV-------HSDAIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIKNIVFSSTAATYGIPEQVPILETAPQ-NPINPYGESKLMMETIMKWADQAYGIKFVAL-RYFNVAGDKPDGSIGEDHKP-ETHLLPIILQVAQGVRDKIMIFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESNVFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED |
| 1KVT Chain:A ((1-338)) | MRVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA-IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVT-RTLDEMAQDTWHWQSRHPQGYPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154921 for 2904 contacts (-53.3/contact) +
2D Compatibility (PS) -35932 + (NN) -20891 + (LL) 120
1D Compatibility (HY) -27200 + (ID) 6750
Total energy: -245574.0 ( -84.56 by residue)
QMean score : 0.547
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