Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKFGFLSVLEEELDKHLQYDFAMDWDKKNHTVEVTFILEAQNSSAIETVDDQGETSSEDIVFED--------YVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY |
4C3H Chain:K ((58-128)) | -----------------------------------------------------GTSASFQIVEEDHTLGNALRYVIMKNP-----DVEFCGYSIPHPSENLLNIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIKSM--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3698 for 391 contacts (9.5/contact) +
2D Compatibility (PS) -6808 + (NN) -2779 + (LL) 5572
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -5067.0 ( -12.96 by residue)
QMean score : 0.100
|
|
|