Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRID---DKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASK-FTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
2OB0 Chain:A ((6-155))
-RIELGDVTPHNIKQLKRLNQVIFPVSYND----------KFYKDVLE-VGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRL--GIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYK-RIEPADAHVLQKNL-
General information:
TITO was launched using:
RESULT:
Template:
2OB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53427 for 1101 contacts (-48.5/contact) +
2D Compatibility (PS) -15290 + (NN) -3305 + (LL) 1016
1D Compatibility (HY) -8400 + (ID) 1250
Total energy: -80656.0 ( -73.26 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2OB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OB0-query.scw
PDB file :
Tito_Scwrl_2OB0.pdb
: