Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQGTVKWFNSEKGFGFISSETGT-DVFAHFSEIKVDGFKTLEEGQKVTFDIQDGQRGPQATNINLVK
3I2Z Chain:B ((5-69))
--KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVTAL-
General information:
TITO was launched using:
RESULT:
Template:
3I2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21665 for 438 contacts (-49.5/contact) +
2D Compatibility (PS) -6523 + (NN) -1227 + (LL) 324
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -36941.0 ( -84.34 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3I2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I2Z-query.scw
PDB file :
Tito_Scwrl_3I2Z.pdb
: