Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MPSEKEILDALSKVYSEEVIQADDYFRQAIFELASQLEKEGMNSLLATKIDSLINQYVLTHQFDAPKSIFDLSRLVKTKASHYKGTAISAIMLGSFLSGGPK--
2LSE Chain:A ((1-101))
MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYK-DAPNAVMEQLLEEIEKLLKKAGSLVPR---GSYLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1921 for 659 contacts (-2.9/contact) +
2D Compatibility (PS) -10870 + (NN) -7425 + (LL) 720
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -20546.0 ( -31.18 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_2LSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LSE-query.scw
PDB file :
Tito_Scwrl_2LSE.pdb
: