Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIH-LGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQ-KHKVVPSVNGTPKS-IVVTVQNIYYSPLSSSTLKKRAQFMFEIDS-
3NZL Chain:A ((7-79))
HHSHMLPPEQ------------WSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKT
General information:
TITO was launched using:
RESULT:
Template:
3NZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3552 for 398 contacts (-8.9/contact) +
2D Compatibility (PS) -6935 + (NN) -661 + (LL) 916
1D Compatibility (HY) 2800 + (ID) 350
Total energy: -7782.0 ( -19.55 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_3NZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NZL-query.scw
PDB file :
Tito_Scwrl_3NZL.pdb
: