Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNNHFFYVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIFAESFSTKREAMQAEYYFKKLTRKKKELYIEEKRNSKE------------AVYVKAPNEL-
1RKI Chain:A ((1-101))
----MKKHIIIKTIPKK-EEIISRDLCDCIYYYD--NSVICKPIG-PSKVYVSTSLENLEKCLQL-HYFKKLVKNIEIF--DEVHNSKPNCDKCLIVEIGGVYFVRRVNGVP
General information:
TITO was launched using:
RESULT:
Template:
1RKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11071 for 596 contacts (-18.6/contact) +
2D Compatibility (PS) -9272 + (NN) -1329 + (LL) 692
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -27830.0 ( -46.69 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1RKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RKI-query.scw
PDB file :
Tito_Scwrl_1RKI.pdb
: