Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MICQECHERPATFHFTKVVNGEKIEVHIC----EQCAKENSDSYGISANQGFSIHNLLSGLLNMDSSFQNAGTQMFSHSEQISACPKCGMTFQQFRKIGRFGCSECYK----TFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDMLKKELESLIHQEEFENAAHVRDQIRLLEQSLKSTDSEEEQE |
3PME Chain:A ((284-387)) | --------------YSRILNGDDIMFHMLYDSREYMIIRDTDT--IYATQGGQCSKNCVYALKLQSNLGNYGIGIFSIKNIVSQ--YCSQIFSSFMK-NTMLLADIYKPWRFSFENAYTPV------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8817 for 529 contacts (16.7/contact) +
2D Compatibility (PS) -9521 + (NN) 1038 + (LL) 6748
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -3418.0 ( -6.46 by residue)
QMean score : -0.077
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