Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKEKKGAKHELDLSSILQFVAPGTPLRAGMENVLRANTGGLI-VVGYNDKVKEVVDGGFHINTAFSPAHLYELAKMDGAIILSDSGQKILYANTQLMPDATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQENMKYTLKDIGFILTKANQAIQTLEKYKTILDKTINALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIKLQVIELITDMEEEAALFIKDYVKEKIKDPFVLLKELQDMSSYDLLDDSI---------VYKLLGYPA--STNLDDY-VLPRGYRLLNKIPRLPMPIVENVVEAFGVLPRIIEASAEELDEVEGIGEVRAQKIKKGLKRLQEKHYLDRQL
4YXM Chain:B ((35-373))-----------------IKLISPGTELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMNGAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELLRIVEEIRPYIVELGEEGRLARMQLRELTEDVDDLLVLLIMDYSSE----------EVEEETAQNILQDFITRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAISESISSLKHR-------


General information:
TITO was launched using:
RESULT:

Template: 4YXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207767 for 2550 contacts (-81.5/contact) +
2D Compatibility (PS) -35757 + (NN) -15577 + (LL) 2704
1D Compatibility (HY) -33200 + (ID) 7500
Total energy: -297097.0 ( -116.51 by residue)
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_4YXM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YXM-query.scw
PDB file : Tito_Scwrl_4YXM.pdb: